@COMMENT This bibtex publication entry came from Jeff Bilmes's publication pages at
@COMMENT http://melodi.ee.washington.edu/~bilmes
@COMMENT The complete bibfile can be found at:
@COMMENT http://melodi.ee.washington.edu/~bilmes/bib/bilmes.bib
@COMMENT -
@Article{wei2016genomicselection,
author="Wei, Kai and Libbrecht, Maxwell W. and Bilmes, Jeffrey A. and Noble, William Stafford",
title="Choosing panels of genomics assays using submodular optimization",
journal="Genome Biology",
year="2016",
volume="17",
number="1",
pages="229",
abstract="Due to the high cost of sequencing-based genomics assays such as ChIP-seq and DNase-seq, the epigenomic characterization of a cell type is typically carried out using a small panel of assay types. Deciding a priori which assays to perform is, thus, a critical step in many studies. We present the submodular selection of assays (SSA), a method for choosing a diverse panel of genomic assays that leverages methods from submodular optimization. More generally, this application serves as a model for how submodular optimization can be applied to other discrete problems in biology.",
issn="1474-760X",
doi="10.1186/s13059-016-1089-7",
url="http://dx.doi.org/10.1186/s13059-016-1089-7",
}